project: FAANG
assay type: scRNA-seq
sample storage: fresh
sample storage processing: fresh
sampling to preparation interval: 4.0 hours
experimental protocol:
https://api.faang.org/files/protocols/samples/INRA (show full text...)(hide...)https://api.faang.org/files/protocols/samples/INRAE_SOP_METABOWEAN_20240228.pdf
extraction protocol:
https://api.faang.org/files/protocols/samples/INRA (show full text...)(hide...)https://api.faang.org/files/protocols/samples/INRAE_SOP_METABOWEAN_20240228.pdf
library preparation location:
Plateau GeT-Santé, INSERM Rangueil – UMR 1297 (I2M (show full text...)(hide...)Plateau GeT-Santé, INSERM Rangueil – UMR 1297 (I2MC), BP 84255 31432 TOULOUSE Cedex 4, France
library preparation location longitude: 1.4996292543061 decimal degrees
library preparation location latitude: 43.527420877489 decimal degrees
library preparation date: 2022-10-26 YYYY-MM-DD
sequencing location:
GeT-PlaGe, 24 Chemin de Borde Rouge, 31326 Castane (show full text...)(hide...)GeT-PlaGe, 24 Chemin de Borde Rouge, 31326 Castanet-Tolosan France
sequencing location longitude: 1.4996292543061 decimal degrees
sequencing location latitude: 43.527420877489 decimal degrees
sequencing date: 2024-01-15 YYYY-MM-DD
experiment target: polyA RNA
library construction: 10X v3
primer: oligo-dT
amplification method: PCR
amplification cycles: 12.0
end bias: 3 prime tag
library strand: first (antisense)
spike in: none
library generation protocol:
https://api.faang.org/files/protocols/samples/INRA (show full text...)(hide...)https://api.faang.org/files/protocols/samples/INRAE_SOP_METABOWEAN_20240228.pdf
sequencing protocol:
https://api.faang.org/files/protocols/samples/INRA (show full text...)(hide...)https://api.faang.org/files/protocols/samples/INRAE_SOP_METABOWEAN_20240228.pdf
read strand: antisense